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Health-Informatics-UoN/carrot-docs
Welcome
Data Standards
Carrot-Mapper
Carrot-Mapper
Quickstart [WIP]
User Guide
User Guide
Projects, Datasets, Scan Reports, and Permissions
Uploading a Scan Report file
Developer Guide
Developer Guide
Quickstart
Quickstart
Web Application
OMOP
Internal data structures
Mapping Rules
API
Azure Functions
Azure Functions
Local Functions
UploadQueue
Rules
NLPQueue
Database Migrations
Adding new vocabularies
Testing
Testing
Running Django Tests
Writing Django Tests
Carrot-CDM
Carrot-CDM
User Guide
User Guide
FAQ
Installing
ETL
ETL
Quick Guide
Detailed Guide
Detailed Guide
Yaml Configuration
Extract
Extract
Input Data
Pseudonymisation
Transform
Transform
JSON Rules
Command Line
GUI
Load
Common Errors
Additional Tools
Additional Tools
Command Line Interface
Generating Synthetic Data
Generating Synthetic Data
Command Line
By Hand
Developer Guide
Developer Guide
CDM
CDM
Overview
Tables
Tables
Common
Person
Condition Occurrence
Visit Occurrence
Measurement
Observation
Drug Exposure
Procedure Occurrence
Specimen
Source documentation
Source documentation
CLI
CLI
CLI
Run
Data Collections
File Helpers
Rule Helpers
Logging
Profiling
Developer Guide
ETL Workbook Example
Performance
Performance
cProfile
Notebooks
Notebooks
Part 1 Introduction
Part 2 Command Line
Part 3 ETL Tool
Part 4 Local
Part 5 SQL
Part 6 BCLink
Part 7 Manually Loading Dataframes
Part 8 Create PyConfig
Carrot Pseudonymise
Carrot Pseudonymise
Pseudonymisation
BCLink
BCLink
Test Link (for developers)
Test Link (for developers)
Via SSH
Notes
Notes
Sep 14
Sep 15
Sep 28
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